​
MolecularCog(G) Atlas
The following maps were obtained by Cytoscape extraction with the ontology databases
Maps
  1. Type of Sample: In Vitro
  2. Type of Sample: In Vivo (Post Surgical)
  3. Type of Sample: Post-Mortem
  4. ​Type of Sample: Other
  5. Tissue and Structure: Blood 
  6. Tissue and Structure: Saliva 
  7. Tissue and Structure: All Brain 
  8. Tissue and Structure: Neocortex 
  9. Tissue and Structure: Insular Cortex 
  10. Tissue and Structure: Whole Brain 
  11. Tissue and Structure: Central Anterior Frontal, Medial Anterior Parietal, Lateral Temporal, Posterior Superior Frontal, Inferior Parietal, Inferior Temporal Gyrus, Anterior Superior Frontal 
  12. Tissue and Structure: Dorsolateral Prefrontal 
  13. Tissue and Structure: Postsynaptic Density (hPSD) 
  14. Tissue and Structure: Myelin (Frontal Lobe) 
  15. Tissue and Structure: Membrane Proteins (Ontology) 
  16. Brain Type: Pathological Brain (All) 
  17. Brain Type: Pathological Brain (Colloid cyst, Glial neoplasm or Lesional Epilepsy) 
  18. Brain Type: Healthy Brain (All) 
  19. Brain Type: Healthy Brain (Cardiopulmonary Arrest, Myocardial Infarct or Mesenteric Bleeding) 
  20. Brain Type: Healthy Brain (Receptoromics (Psychoactive Drug)) 
  21. Biomarker: Disease State (All) 
  22. Biomarker: Disease State (CNS Disease Only) 
  23. Biomarker: Disease State (PNS Disease Only) 
  24. Biomarker: Disease State (PNS & CNS Disease) 
  25. Biomarker: Disease State (Non NS) 
  26. Biomarker: Health State Biomarker 
  27. Biomarker: Proposed as Biomarker 
  28. Detected: Present in the Saliva Proteome ​
Ontology || Type || Updated on || Pathways/Genes
​REACTOME || Pathways || 17.02.2018 || 2155/10609 (Croft et al., 2010)  
KEGG || COMPOUND || 16.02.2018 || 267/3657 (Hattori et al., 2003)
KEGG || KEGG || 16.02.2018 || 316/7325 (Hattori et al., 2003) 
GO || Molecular Function || 16.02.2018 || 4612/17556 (Hill et al., 2008)
GO || Cellular Component || 16.02.2018 || 1924/18620 (Hill et al., 2008) 
GO || Immune System || 16.02.2018 || 1170/3152 (Diehl et al., 2007) 
GO || Biological Process || 16.02.2018 || 15785/17540 (Botstein et al., 2000)

References
          Bindea, G., Mlecnik, B., Hackl, H., Charoentong, P., Tosolini, M., Kirilovsky, A., ... & Galon, J. (2009). ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. Bioinformatics, 25(8), 1091-1093.
          Botstein, D., Cherry, J. M., Ashburner, M., Ball, C. A., Blake, J. A., Butler, H., ... & Eppig, J. T. (2000). Gene Ontology: tool for the unification of biology. Nat genet, 25(1), 25-9.
          Croft, D., O’kelly, G., Wu, G., Haw, R., Gillespie, M., Matthews, L., ... & Jupe, S. (2010). Reactome: a database of reactions, pathways and biological processes. Nucleic acids research, 39(suppl_1), D691-D697.
          Diehl, A. D., Lee, J. A., Scheuermann, R. H., & Blake, J. A. (2007). Ontology development for biological systems: immunology. Bioinformatics, 23(7), 913-915.
          Hattori, M., Okuno, Y., Goto, S., & Kanehisa, M. (2003). Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways. Journal of the American Chemical Society, 125(39), 11853-11865.
          Hill, D. P., Smith, B., McAndrews-Hill, M. S., & Blake, J. A. (2008, April). Gene Ontology annotations: what they mean and where they come from. In BMC bioinformatics (Vol. 9, No. 5, p. S2). BioMed Central.